Open rohan-uiuc opened 10 months ago
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Inputs conda install -c bioconda bioconductor-deseq2 to tool {'name': 'terminal', 'description': 'Run shell commands on this MacOS machine.'} were rejected.
Thanks for opening a new issue! I'll now try to finish this implementation and open a PR for you to review. I'll comment if I get blocked or 'request your review' if I think I'm successful. So just watch for emails while I work. Please comment to give me additional instructions.
Thanks for opening a new issue! I'll now try to finish this implementation and open a PR for you to review. I'll comment if I get blocked or 'request your review' if I think I'm successful. So just watch for emails while I work. Please comment to give me additional instructions.
list index out of range
Thanks for opening a new issue! I'll now try to finish this implementation and open a PR for you to review. I'll comment if I get blocked or 'request your review' if I think I'm successful. So just watch for emails while I work. Please comment to give me additional instructions.
list index out of range
Thanks for opening a new issue! I'll now try to finish this implementation and open a PR for you to review. I'll comment if I get blocked or 'request your review' if I think I'm successful. So just watch for emails while I work. Please comment to give me additional instructions.
Thanks for opening a new issue! I'll now try to finish this implementation and open a PR for you to review. I'll comment if I get blocked or 'request your review' if I think I'm successful. So just watch for emails while I work. Please comment to give me additional instructions.
Inputs jupyter notebook to tool {'name': 'terminal', 'description': 'Run shell commands on this MacOS machine.'} were rejected.
Experiment Type: RNA-Seq Sequencing of total cellular RNA
Workflow Management: Bash/SLURM Scripting and job scheduling
Software Stack: FastQC MultiQC STAR RSEM samtools DESeq2
What else to know about the pipeline? I am working PBMC samples collected from patients that are undergoing immunotherapy. Use the report available at ⭐️____Report_Antonson_WholeBrain_2022Mar.html for reproducing results and getting insights about steps.