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KatyBrown / CIAlign

MIT License
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Missing modules with installation #52

Closed dgslos closed 6 months ago

dgslos commented 1 year ago

I'm on Ubuntu 22.04 with python 3.10.6 and the installation with pip from PyPi or cloning from the git repo is no longer working properly. Several dependencies are missing.

I fixed it by installing them seperatly. Is it possible to add all the dependencies in the setup.py?

Part of the errors:

Traceback (most recent call last):
  File "/usr/local/bin/CIAlign", line 8, in <module>
    import CIAlign.runCIAlign as runCIAlign
  File "/usr/local/venvs/cialign/lib/python3.10/site-packages/CIAlign/runCIAlign.py", line 5, in <module>
    import pandas as pd
ModuleNotFoundError: No module named 'pandas'

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/usr/local/bin/CIAlign", line 10, in <module>
    import argP
ModuleNotFoundError: No module named 'argP'
KatyBrown commented 6 months ago

Sorry for the very slow response, but this has now been fixed.