Finalize SNPNet (todolist from meeting with doug)

[KennethEnevoldsen]

On CHR 22:

• [x] #12
  • [ ] na to expected and na to best guess
  • [ ] perform prediction (on height) w. no compression
  • [ ] both using standard prediction model and convert to .sped such that we can do the analysis using LDAK
• [ ] slowly scale down compression (increasing stride)
• [ ] compare w. PCA
• [ ] test w/o positional encoding
• [ ] test w/o basepair encoding
• [ ] read up on variational autoencoders.

[KennethEnevoldsen]

• [ ] Move over a piece of test data (running)
• [ ] create a train test split function
• [ ] Setup existing model training on test data
  • [ ] start a new wandb
• [ ] Add linear encoding

[KennethEnevoldsen]

• [ ] change to chr 22