KennthShang PhaGCN2.0 issues - Githubissues

KennthShang / PhaGCN2.0

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I input 1000 sequences (seq len> length cutoff), but only 900+ or 800+ appeared in "single_contig/" and the final_prediction.csv

#9 actledge closed 2 months ago
1
create database failed

#8 mengyuan09876 opened 7 months ago
5
1. It runs slowly, how to accelerate. Can metagenomes be used as input?

#7 TiAmoTYX opened 8 months ago
2
subprocess.CalledProcessError

#6 liaohu1231 opened 8 months ago
2
Pre-trained CNN Error for file contig_0

#5 chengninghui closed 2 months ago
2
ValueError: No objects to concatenate

#4 Cr7-L closed 2 months ago
1
ModuleNotFoundError: No module named 'sklearn'

#3 MoriatyZy closed 2 months ago
4
Command 'cat pred/* > final_prediction.csv' returned non-zero exit status 1.

#2 ZhengXiaoxuan11542 closed 1 year ago
5
Recommend for preparing viral bins for compatibility with PhaGCN input format

#1 liangjinsong closed 2 months ago
2