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Kevin-Haigis-Lab / speclet

A Bayesian hierarchical model to discover tissue-specific cancer driver genes and synthetic lethal interactions from CRISPR/Cas9 LoF screens.
GNU General Public License v3.0
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Refactor cancer gene comutation matrix construction #184

Closed jhrcook closed 2 years ago

jhrcook commented 2 years ago

There is a lot of machinary for creating the cancer gene comutation matrix in speclet.baysian_models.lineage_hierarchical_nb.py. Separate this into its own module and test.