Closed bioinfouser closed 3 years ago
Hi,
hmm that shouldn't be happening.
Can you quickly check that you have a recent version, using:
scaden --version
And if you type in scaden, do you see something like this:
____ _
/ ___| ___ __ _ __| | ___ _ __
\___ \ / __/ _` |/ _` |/ _ \ '_ \
___) | (_| (_| | (_| | __/ | | |
|____/ \___\__,_|\__,_|\___|_| |_|
Usage: scaden [OPTIONS] COMMAND [ARGS]...
Options:
--version Show the version and exit.
--help Show this message and exit.
Commands:
example
predict Predict cell type composition using a trained Scaden model
process Process a dataset for training
simulate Create artificial bulk RNA-seq data from scRNA-seq dataset(s)
train Train a Scaden model
Meaning, does it list 'example' as command?
Hello Kevin,
After installing scaden via pip(I am using macOS), I tried running it for the example data, but it gives error saying:
Error: No such command 'example'.
Could you suggest why this is happening?