Long reads RNA - Githubissues

Kingsford-Group / squid

SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data

BSD 3-Clause "New" or "Revised" License

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Open sunshine-lp0 opened 3 years ago

sunshine-lp0 commented 3 years ago

Hi,

Can squid call SV for long reads RNA-seq (cDNA) data from Oxford Nanopore or Pacbio now? Thank you very much!

Best, ping