[x] Since the relevant data is in the standard output of NWChem. This data lives in a file whose name is dependent on the job scheduler. Currently is assume the filename format used by Sun Grid Engine.
This was addressed by adding a redirect to the submission script removing the file name's dependency on the job scheduler
[ ] Consider renaming the json file after it is generated since the conversion script just appends '.json' the output filename.
[ ] Add the location of the conversion script (NWChemJsonConversion) to cluster configuration. Right now it is hard-coded for ulmus. Create docker image that contains the full software stack to prepare the NWChem output for visualization. This includes:
Following issues remain:
Add the location of the conversion script (NWChemJsonConversion) to cluster configuration. Right now it is hard-coded for ulmus.Create docker image that contains the full software stack to prepare the NWChem output for visualization. This includes: