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Kitware / SlicerSALT

An open-source, free comprehensive software that will allow biomedical scientists to precisely locate shape changes in their imaging studies. This software called Slicer Shape AnaLysis Toolbox (SlicerSALT), will enhance the intuitiveness and ease of use for such studies, as well as allow researchers to find shape changes with higher statistical power. Altogether this constitutes a crucial resource for the imaging field that will enable many and important new findings in biomedical imaging studies.
https://salt.slicer.org
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Shape Regression: Sample data different from tutorial #205

Open jamesfishbaugh opened 4 years ago

jamesfishbaugh commented 4 years ago

In the Regression Computation module, the "Download sample data" button downloads a sequence of 5 shapes representing a sphere deforming into an ellipse. However, the tutorial references 3 shapes which is a totally different shape evolution. I think this may be confusing to users who expect the tutorial refers to the sample data (the download button is directly below the tutorial link).

Also, the example in the tutorial is a much more interesting sequence as a showcase for the module, representing non-monotonic shape change with non-constant velocity and changes of direction. It also estimates much faster, which may be critical to a new user who tries the module for the first time.

bpaniagua commented 4 years ago

I understand. @jamesfishbaugh could you please send us the data you used to create the tutorial? We will update the "download sample data" functionality for this module.

iPsych commented 4 years ago

I understand. @jamesfishbaugh could you please send us the data you used to create the tutorial? We will update the "download sample data" functionality for this module.

Hello, is it possible to add menu for put general continuous measure? Does the example @jamesfishbaugh mentioned is the one different from aging?

jamesfishbaugh commented 4 years ago

Here is the tutorial data.

On Thu, Oct 31, 2019 at 8:09 AM Beatriz Paniagua notifications@github.com wrote:

I understand. @jamesfishbaugh https://github.com/jamesfishbaugh could you please send us the data you used to create the tutorial? We will update the "download sample data" functionality for this module.

— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub https://github.com/Kitware/SlicerSALT/issues/205?email_source=notifications&email_token=AC4Y4CSYZUD6JXJVHW2YJF3QRLDHXA5CNFSM4JG5ONPKYY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOECXQOHA#issuecomment-548341532, or unsubscribe https://github.com/notifications/unsubscribe-auth/AC4Y4CTMGH5UL55TZO2KAXDQRLDHXANCNFSM4JG5ONPA .

-- James Fishbaugh, PhD Research Assistant Professor Computer Science and Engineering Department NYU Tandon School of Engineering 2 MetroTech Center, 10.039 Brooklyn, NY 11201

iPsych commented 4 years ago

@jamesfishbaugh

Thanks but I can't see the link. Would you check it again?

bpaniagua commented 2 years ago

Hi @jamesfishbaugh can you see if this is still a problem?