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Kitware / SlicerSALT

An open-source, free comprehensive software that will allow biomedical scientists to precisely locate shape changes in their imaging studies. This software called Slicer Shape AnaLysis Toolbox (SlicerSALT), will enhance the intuitiveness and ease of use for such studies, as well as allow researchers to find shape changes with higher statistical power. Altogether this constitutes a crucial resource for the imaging field that will enable many and important new findings in biomedical imaging studies.
https://salt.slicer.org
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Infant hippocampus landmark alignment #302

Open pkashya opened 8 months ago

pkashya commented 8 months ago

Hi,

I’m trying to run landmark-based rigid alignment on some infant hippocampus shape measures. I am unable to find a fiducials (*.fcsv) file for doing so. Please advise.

Thanks for all the help,

bpaniagua commented 6 months ago

Hi @pkashya the fiducial for rigid alignment are part of the user input to the module. @vicory please correct me if I am wrong.

vicory commented 6 months ago

Yes, that is correct.

You can find a couple of example surfaces and associated landmarks here as an example of how to set things up: https://data.kitware.com/#collection/586fbb7b8d777f05f44a5c7b/folder/5ee25f079014a6d84eb9169c