It would be helpful to have the option to register images, especially for time-lapse imaging. It would be good to have the option of doing control points and/or pystackreg for automated transformations. We could do this either as a docker plugin or a worker? Not sure if a worker would have sufficient control.
If it is possible to do this within a worker, then we can have some mix of control points and pystackreg with certain frames skipped, depending. That would be relatively easy to implement.
It would be helpful to have the option to register images, especially for time-lapse imaging. It would be good to have the option of doing control points and/or pystackreg for automated transformations. We could do this either as a docker plugin or a worker? Not sure if a worker would have sufficient control.
The multi-source specification is here: https://girder.github.io/large_image/multi_source_specification.html
And there is an example of setting these values from histomicsTK: https://github.com/DigitalSlideArchive/histomicstk-extras/blob/master/histomicstk_extras/RegisterImages/RegisterImages.py#L175-L193
If it is possible to do this within a worker, then we can have some mix of control points and pystackreg with certain frames skipped, depending. That would be relatively easy to implement.