Open alptaciroglu opened 4 years ago
Hi @alptaciroglu , is it possible to send me the data set (klaus.schliep@gmail.com), so I can try to reproduce the error. Klaus
Hello @KlausVigo,
Thanks for your reply. I sent the data set. It is in phyDat format and saved as RData. Cheers!
I was wondering if anyone encountered this error while running the "Appendix 2: Standard scripts for amino acid analysis". At the last line of code, I sometimes get this error working with exact same sequences and sometimes not.
What I do is run the script a couple of times and find the one that turns out fine which is a waste of resources, not ideal for automatization of a larger script and also hard to reproduce, unfortunately. Thanks in advance
Here is the truncated code for ease of access.
optimize topology: -56831.99 --> -56831.99 0 optimize edge weights: -56831.99 --> -56831.99 Error in FUN(X[[i]], ...) : one tree has a different number of tips Calls: ebiTreeCreate ... bootstrap.pml -> .compressTipLabel -> lapply -> FUN Execution halted ~