KlementineJBS / ELN_USYD_Honours

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Open Source Antibiotics Twitter Network Analysis #24

Open KlementineJBS opened 2 years ago

KlementineJBS commented 2 years ago

About

This project is looking at the Twitter networks that "talk about antibiotics" and specifically those which discuss antibiotic drug discovery. We hope to examine the place of the @OSAntibiotics Twitter account in the antibiotic drug discovery community, and to determine ways to improve the account's reach so that it can be used effectively to both disseminate research conducted in the open source drug discovery community and attract new collaborators.

Data Collection Protocol

Data collection began on 19-08-2021 and will be repeated on a weekly basis for an undetermined period.

NodeXL's "Twitter Search Network" function was used to search for a total of 8 terms (see: search settings). The metrics collected for each term were:

NB. An explanation of some of these terms can be found here.

Search settings

List of terms searched:

All terms except "antibiotics" were searched using the Twitter User Network 01 - standard worksheet option with automated graph metric calculation. The term "antibiotics" was searched using the Twitter User Network 02 - large worksheet option.

Data was collated in a Google sheet and can be accessed here. (This link allows comments only).

KlementineJBS commented 2 years ago

Alteration to search terms

As of the data collected 26-8-21, better understanding of the software's capacity has led to the use of slightly different search terms, as listed below:

This reduces the number of search terms, making data collection easier, while still collecting the same data. In addition, it allows us to examine the networks of "drug discovery", "open science" and "open source" more holistically. Many tweets that contain one of these search terms will contain both the separate words and a hashtag, so collecting tweets for each iteration separately was leading to overlapping data.

KlementineJBS commented 2 years ago

Data Cleaning

Antibiotics AND DrugDiscovery OR Drug Discovery 09-09

REMOVED:

"People who take antibiotics are at an increased risk of developing colon cancer within five to ten years. https://t.co/dHI6lasmHz https://t.co/tQUGPvlniq"

(1)

KlementineJBS commented 2 years ago

Antibiotics AND OpenScience OR Open Science 08-26

REMOVED

"@LeanTaaS @KairosAerospace @eleanor_health @LanzaTech @C16Bio 8/ There’s loads of other amazing, world-changing jobs at https://t.co/SmRwL5mB9s.

Got questions? Want to post your own open role? DM us!

climatechange #cleanenergy #artificialintelligence #technology #science #future #equality #socialjustice #cancer #space #antibiotics"

(5)

"@jac201315 dr dad: "yeah we have antibiotics now that can take care of this so if it were my kid, i wouldn't go through the surgery. there are more risks to cutting you open and going through that, so we'll give you some antibiotics and you'll be good to go in a week or so."

lol science"

(1)

KlementineJBS commented 2 years ago

Antibiotics AND OpenSource OR Open Source 08-26

REMOVED:

"@generalorthomd @InvictaOrtho @jamesablairMD @MilanSenMD @CenterRotation @StressHoop @SSittonMD @tbclay @NaanDerthaal @ChipRoutt Persistent / recurrent septic arthritis is pretty common (more so than we think). I think you could argue scope vs open I&D. Would repeat Cx, continue antibiotics, make sure diabetes managed, and get medicine to weigh in on source workup."

(10)

EMPTY

KlementineJBS commented 2 years ago

Antibiotics AND OpenSource OR Open Source 09-02

REMOVED:

"Prayers please!!! Big Man can’t come home from the vet!!! He has swelling and fluid at the site of his surgery last week just like last January’s surgery. He has to open him up again tomorrow to find the source. He’s already on 2 antibiotics so he doesn’t know why. Prayers pls🙏🏻 https://t.co/yYwUXf4Epy"

(61)

EMPTY

KlementineJBS commented 2 years ago

Antibiotics AND OpenSource OR Open Source 09-09

Unchanged.

KlementineJBS commented 2 years ago

OSAntibiotics 09-02

REMOVED (overlap with another dataset)

"We need to secure a sample of #MRSA lysate for some mechanism of action experiments. https://t.co/LlsQBuecyD Our original source has dried up. Does anyone have any? Destined for Lee Graves' lab at @UNCPharmacy @danaklug @edwintse @MrBenGP @LoriFerrins @gardp_amr"

(6)

KlementineJBS commented 2 years ago

Antibiotics AND DrugDiscovery OR Drug Discovery 09-16

REMOVED (overlap with another dataset)

"I write about scientists diving for sponges on shipwrecks at the bottom of Lake Superior, and what the search means for antibiotic drug discovery today. Read it @statnews https://t.co/LTf2CF0C7J"

(1)

OSAntibiotics 09-16

Unchanged.

KlementineJBS commented 2 years ago

Antibiotics AND OpenScience OR Open Science 09-23

REMOVED (offtopic)

"Agree with you 100% Ref- Ongoing Medical Science Research Doctors of Medicine New Vaccines Medicines Antibiotics With Open mind All Those whom Disrespect Medical Science Doctors of Medicine Have probably all gone crying To Doctors Asking for Help Throughout Their Lives https://t.co/ALEMeQEsjh"

(1)

(empty)

Antibiotics AND DrugDiscovery OR Drug Discovery 09-23

Unchanged.

KlementineJBS commented 2 years ago

Antibiotics AND DrugDiscovery OR Drug Discovery 09-30

Unchanged.

OSAntibiotics 09-30

REMOVED (overlap with another dataset)

"Postponing this week's meeting to next week - clash/holidays. Current stuff, incl new eval vs MRSA! https://t.co/hANBKUe4L2 @macinchem @MatToddChem @danaklug @edwintse @emeryfs @LoriFerrins @PhrmAlliance"

(7)

"#openscience https://t.co/QCOuk8xB7R"

(2)

(empty)