Closed KlementineJBS closed 7 months ago
Reaction not yet complete at 12 pm. Solution was bright carrot orange so added 282.2 mg NaAsc (1.45 mmo, 0.5 equiv.) and 1-2 mL MeCN.
SM still evident by TLC at 9 am.
Had to turn reaction off over the weekend due to shutdown. Turned back on to stirring (no heating) around 11 am and reaction was complete by 2 pm.
Added some water (20 mL) and worked up with DCM (4 x 20 mL). Washed with water (20 mL) and brine (20 mL), which helped a lot with emulsions. Maybe should do 2 x brine wash next time?
Dried over mag sulphate and rotovapped down. Got a dark red liquid which dried to give a dark red powdery solid.
Empty vial: 16.0701 Full vial: 16.6601 Mass: 590 mg (2.62 mmol, 90%)
Need to separate out remaining propargyl alcohol to determine accurate yield.
NMR of crude product indicates no azide SM remaining but some impurities - not yet identified. Possibly due to contamination of sample tube.
Impurity is visible by TLC - spots didn't separate well.
Product - F8-42 KBS28-6 F8-42.pdf KBS28-6 F8-42_1.zip
Vial: 15.5975 Mass: 477.8 mg (2.12 mmol, 73%)
Product looks clean.
Other compounds isolated
F1-2 - azide SM Vial tare: 15.5975 Mass: 11.5 mg
F3-7 - uncertain, should characterise further Vial tare: 15.7132 Mass: 21.9 mg
KBS28-6 column fractions.pdf KBS28-6 F3-7_1.zip KBS28-6 F1-2_1.zip
Link to HIRAC and master page. Original method can be found in J. Batten's PhD thesis (2022).
KBS28 - Click coupling with 1-azidonaphthalene and propargyl alcohol.docx
Previous attempt is #150
Using 2 equivalents of DIPEA and 1.2 equivalents propargyl alcohol. Will add extra propargyl alcohol (1.2 equiv.) if not done after reacting overnight. Next step is to try heating.
Reaction scheme
Outcome