KlementineJBS / USYD_PhD_ELN

This repository forms the electronic laboratory notebook (ELN)for Klementine Burrell-Sander's PhD's
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KBS44, 52, 53 (Nosyl deprotection) - master page #186

Open KlementineJBS opened 4 months ago

KlementineJBS commented 4 months ago

Nosyl deprotection is facilely achieved with thiophenol but this is discouraged due to its hazards and foul smell. Matoba et al discuss odorless alternatives and while they found p-mercaptobenzoic acid to be the best reagent, o-mercaptobenzoic acid (thiosalicylic aicd) is similarly effective and easy to remove. It requires slightly longer reaction times etc but is considerably cheaper and already owned by the group. Both can be used with K2CO3.

Proceeds via formation of Meisenheimer complex (SnAR).

Link to HIRAC

KBS44 Nosyl deprotection of linear amines.docx

Reaction scheme

KBS44 - Nosyl deprotection of linear amine

KlementineJBS commented 4 months ago

Attempts

Identifier Link Solvent Yield Other
44-1 #159 DMF contaminated with DIAD SM = KBS49-1c F7
44-2 #188 DMF 52% fully deprotected SM = KBS49-2c F75-120
53-1 #190 DMF 20% purified SM = KBS48-2b 36-110
53-2 #193 DMF - SM = pooled from KBS48-1/2
52-1 #191 DMF - SM = KBS51-1 F37-89
KlementineJBS commented 3 months ago

Characterisation

H NMR

See #188

1H NMR (300 MHz, Chloroform-d) δ 8.07 – 7.90 (m, 4H), 7.86 (s, 2H), 7.68 – 7.45 (m, 10H), 4.10 – 4.05 (m, 4H), 2.76 (t, J = 7.2 Hz, 4H), 1.75 (s, 4H), 1.35 (s, 8H).

KlementineJBS commented 3 months ago

Ideas

Could use a "stronger" thiol i.e. one with a better stabilised S-.

Obvious solutions are mercaptothanol, thiophenol, etc but these are quite hazardous. 1-decanethiol is safer but not on hand.

2,2'-(Ethylenedioxy)diethanethiol, 4-Methoxythiophenol, 1-dodecanethiol and thioanisole are reasonably safe and could be borrowed from another lab.

KlementineJBS commented 2 months ago

Thiols

NMR of 2,2′-(Ethylenedioxy)diethanethiol suggests it is pure

1H NMR (300 MHz, Chloroform-d) δ 3.68 – 3.58 (m, 4H), 2.71 (dt, J = 8.2, 6.4 Hz, 2H), 1.60 (t, J = 8.2 Hz, 1H).

thiol.pdf nmr300_20240419_KBS thiol_1.zip