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KlementineJBS / USYD_PhD_ELN

This repository forms the electronic laboratory notebook (ELN)for Klementine Burrell-Sander's PhD's
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MTS master page #241

Open KlementineJBS opened 1 month ago

KlementineJBS commented 1 month ago

Protocol

to be updated

KlementineJBS commented 1 month ago

Repeats

Batch Compounds MYOS codes)
USyd June 2024 420, 423, 432_01, 535, 539, 615 - 619, 726 - 731, 733
U of York Aug 2024 738 - 772 inclusive
UCL Sep 2024 432_02, 605

mm55 only

Identifier Link Compounds Hi-Lo Compounds MIC Notes Data
1 #210 USyd June 2024 USyd June 2024 invalid due to incorrect wavelength 2024-08-22 KBS MTS-1 results.xlsx
2 #212 USyd June 2024 USyd June 2024 invalid due to incorrect wavelength
3 #216 USyd June 2024 + U of York August 2024 USyd June 2024
4 #220 USyd June 2024 + U of York August 2024 USyd June 2024
5 #224 USyd June 2024 + U of York August 2024 + UCL 432_02, 605 USyd June 2024 2024-09-26 KBS MTS-5 results .xlsx
6 #227 U of York August 2024 + UCL Sep 2024 U of York August 2024 + UCL Sep 2024
7 #230 U of York August 2024 + UCL Sep 2024 U of York August 2024 + UCL Sep 2024 2024-10-08 KBS MTS-7 results.xlsx
KlementineJBS commented 1 month ago

Other strains

Identifier Link Strains Notes
8 #238 mm55, CBS contamination in some
9 #245 mm55, CBS, Parijs
10 #246 CBS, Parijs
11 #249 CBS, Parijs, SO1, Peru
12 #250 Peru, mm14, SO1
13 #253 P1, CBS, I1
14 #255 mm55, Parijs, Peru in progress
15 #258 P1, SO1, mm14 planned
16 #259 SO1, mm14, I1 planned
KlementineJBS commented 1 week ago

Results

Raw data can be found on each experiment's page.

High-low testing (mm55)

USyd, Uni of York, UCL: High-low results Aug - Oct 2024 (1).xlsx

MIC (mm55)

USyd: MIC and IC50 results Aug - Oct 2024.xlsx Uni of York, UCL: Uni of York MIC and IC50 (Nov 2024).xlsx

Note: compound 752 didn't achieve 50% inhibition in 2 of the 3 assays, so IC50 and IC90 were not calculated.

MIC (other strains)

to be updated