KlementineJBS / USYD_PhD_ELN

This repository forms the electronic laboratory notebook (ELN)for Klementine Burrell-Sander's PhD's
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BAC-8 - resazurin MIC (A madurae, N brasiliensis, S somaliensis, S aureus) #262

Open KlementineJBS opened 1 week ago

KlementineJBS commented 1 week ago

Master page is #260

Things to try

In this case, I will only adjust the amount of dye so that it is more comparable to #256. Future attempts can include the altered volumes.

Plate plan

image

KlementineJBS commented 1 week ago

25.11.24

Made up plates as described but didn't add resazurin - wasn't sure about stability etc. Probably fine but will add it tomorrow anyway. Used a combination of MH broth opened last Friday and a new bottle opened today.

KlementineJBS commented 6 days ago

26.11.24

Made up all inoculums as usual. Same inoculums used as in #263, and A madurae made up from a plate subbed 21/11 as well.

Accidentally inoculated Am negative control in column 1.

Placed in 37 C incubator at 12 pm.

Photo taken before incubation:

Image

KlementineJBS commented 5 days ago

27.11.24

Can already see clear colour change in S aureus. Will read on Friday (72 hrs) along with N brasiliensis and S somaliensis.

PXL_20241127_080932410

KlementineJBS commented 4 days ago

28.11.24

From above

PXL_20241128_090728311

From below PXL_20241128_091334424

PXL_20241128_091346762

KlementineJBS commented 3 days ago

29.11.24

2024-11-29 BAC-8 (Sa) rerun.xlsx 2024-11-29 BAC-8 (Sa).xlsx 2024-11-29 BAC-8 (Nb, Ss).xlsx BAC-8 resazurin MIC.zip 2024-11-29 BAC-8 (Nb, Ss) rerun.xlsx

PXL_20241129_082444567

PXL_20241129_082851045 PXL_20241129_082918373

After centrifuging and transfer:

original_f664ea02-19f6-4531-b68a-4ecd19609577_PXL_20241129_085305049

original_0e855382-e5db-4737-b124-6e0d5825eb6b_PXL_20241129_085239759

KlementineJBS commented 13 hours ago

02.12.24

Plates after 6 days growth (left) side-by-side with plates with 3 days growth (right, from #264). Left-hand plates have had 100 uL removed, except for A madurae columns.

PXL_20241202_094054607

A madurae plate closeup.

PXL_20241202_094108192

Both plates from beneath (N brasiliensis has paper towel): PXL_20241202_094704823 PXL_20241202_094730892

Cross contamination is still an issue.