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KlugerLab / ALRA

Imputation method for scRNA-seq based on low-rank approximation
MIT License
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ALRA and Seurat #17

Open jsim91 opened 2 years ago

jsim91 commented 2 years ago

I see in the README that ALRA was previously integrated into Seurat with the RunALRA function. Why is this no longer the case? I considered reopening issue 15 but chose not to because my question isn't how to use ALRA with seurat, that I can do.

DzenisKoca commented 2 years ago

ALRA is integrated in SeuratWrappers. To use it you need to install and load seuratwrappers library. https://github.com/satijalab/seurat-wrappers/blob/master/docs/alra.md