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Knowledge-Graph-Hub / kg-covid-19

An instance of KG Hub to produce a knowledge graph for COVID-19 response.
https://github.com/Knowledge-Graph-Hub/kg-covid-19/wiki
BSD 3-Clause "New" or "Revised" License
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What is the zhou_host_protein transformed dataset? #403

Closed linikujp closed 3 years ago

linikujp commented 3 years ago

Dear all, I am researching the data source that is used for constructing the KG-COVID-19. I noticed that there is a set of dataset called "zhou_host_protein". I also see in this file: https://kg-hub.berkeleybop.io/kg-covid-19/current/transformed/zhou_host_proteins/edges.tsv It seems from this file, that the Zhou_host-proteins associated with mainly some publications with PMID provided and STRING proteins. However, there is no information about the origin of the "zhou_host_proteins". Can you please direct me to the original publication or the original list that you referred here as "zhou_host_proteins"? Thanks, Asiyah Lin

linikujp commented 3 years ago

Never mind. I found in YAML file: refer to the paper "Network-based drug repurposing for novel coronavirus 2019-nCoV/SARS-CoV-2".