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Knowledge-Graph-Hub / kg-idg

A Knowledge Graph to Illuminate the Druggable Genome
https://knowledge-graph-hub.github.io/kg-idg/
BSD 3-Clause "New" or "Revised" License
9 stars 2 forks source link

Do embedding and tSNE plot for each build #35

Closed caufieldjh closed 2 years ago

caufieldjh commented 2 years ago

Describe the desired behavior

At each build, do the following:

  1. Spin up GCP instance so following steps don't take forever
  2. Prepare embedding with embiggen
  3. Generate tSNE plot
  4. Upload plot along with other graph products

This could also be modularized through NEAT as we'd want to do this for other graphs.