Fixed an error in tcrd-protein transform (it was including DrugCentral IDs, incorrectly)
Updated HPA transform to accommodate newest release (source format changed, of course)
Added transform for HPA protein expression associations by subcell location - these are mapped to GO component terms
Expanded all test_transform_utils cases to cover full Koza transforms - ~they're essentially all integration tests and they take ages to complete, but should cover many more error cases and potential source data issues~ or at least as much of them as we can manage without becoming burdensome
Had intended to include protein families from TCRD here but that may make more sense taken directly from Interpro; the free-text-ish ones in TCRD look like they came from UniProt but those are curated from multiple sources.
Had intended to include protein families from TCRD here but that may make more sense taken directly from Interpro; the free-text-ish ones in TCRD look like they came from UniProt but those are curated from multiple sources.