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Knowledge-Graph-Hub / kg-idg

A Knowledge Graph to Illuminate the Druggable Genome
https://knowledge-graph-hub.github.io/kg-idg/
BSD 3-Clause "New" or "Revised" License
9 stars 2 forks source link

Need a good ol' fashioned dependency fix #89

Closed caufieldjh closed 2 years ago

caufieldjh commented 2 years ago

Describe the bug

As of the most recent commit:

INFO: pip is looking at multiple versions of neo4j to determine which version is compatible with other requirements. This could take a while.
INFO: pip is looking at multiple versions of docutils to determine which version is compatible with other requirements. This could take a while.
INFO: pip is looking at multiple versions of kgx to determine which version is compatible with other requirements. This could take a while.
INFO: pip is looking at multiple versions of biolink-model-pydantic to determine which version is compatible with other requirements. This could take a while.
INFO: pip is looking at multiple versions of <Python from Requires-Python> to determine which version is compatible with other requirements. This could take a while.
INFO: pip is looking at multiple versions of kg-idg to determine which version is compatible with other requirements. This could take a while.
ERROR: Could not find a version that satisfies the requirement linkml-validator>=0.1.0 (from koza) (from versions: none)
ERROR: No matching distribution found for linkml-validator>=0.1.0

So this may just be a matter of pinning to a specific koza.

caufieldjh commented 2 years ago

Turns out this is due to linkml-validator not being compatible with Python <3.8, but the GH actions run 3.7.