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Knowledge-Graph-Hub
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semsim
Write out file with semantic similarity of all pairs of ontology terms in a given ontology
BSD 3-Clause "New" or "Revised" License
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Fixes for getting sem sim for single pairs
#21
caufieldjh
closed
1 year ago
0
Two build fixes
#20
caufieldjh
closed
1 year ago
0
Current graph build name isn't correct in Jenkins build
#19
caufieldjh
closed
1 year ago
0
Name of semsim output isn't correct in Jenkins build
#18
caufieldjh
closed
1 year ago
0
Include subsumer classes in Exomiser output
#17
caufieldjh
opened
2 years ago
3
Jenkins setup and graph loading
#16
caufieldjh
closed
1 year ago
5
calculate 'DAG' Jaccard instead of 'tree' Jaccard
#15
justaddcoffee
opened
2 years ago
3
Update score comparison notebook
#14
caufieldjh
closed
2 years ago
0
Provide semsim with relation-graph relations
#13
caufieldjh
opened
2 years ago
1
Add notebook to compare old and new Resnik|Jaccard values
#12
justaddcoffee
closed
2 years ago
1
Handle more variations in input graph structure
#11
caufieldjh
opened
2 years ago
1
Add option to get similarity for a subset of nodes
#10
caufieldjh
closed
1 year ago
1
tests don't run from pycharm
#9
cmungall
opened
2 years ago
1
Include more edges when making DAG: `part_of`, `is_phenotypic_??` UPHENO_0001/3?
#8
caufieldjh
opened
2 years ago
0
Calculate Phenodigm score
#7
caufieldjh
opened
2 years ago
0
Add option to compute Resnik + Jaccard for single pair
#6
caufieldjh
closed
1 year ago
1
Add option to load local graph
#5
caufieldjh
closed
1 year ago
0
Refactoring to work with PHENIO and use more generalizable frequencies
#4
caufieldjh
closed
2 years ago
28
Add function to produce MP-HP phenodigm file
#3
justaddcoffee
closed
2 years ago
2
Change args to process one ontology at a time, flesh out run a bit
#2
justaddcoffee
closed
2 years ago
6
Implement `tox`
#1
hrshdhgd
closed
2 years ago
5