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Knowledge-Graph-Hub
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universalizer
The KG-Hub Universalizer provides functions for knowledge graph cleanup and identifier normalization.
BSD 3-Clause "New" or "Revised" License
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Remove `sssom` dependency and update for newer version
#37
caufieldjh
closed
8 months ago
1
Fix sssom-py pin
#36
caufieldjh
closed
8 months ago
0
Fix for KeyError when checking existing category assignments
#35
caufieldjh
closed
12 months ago
0
KeyError due to node IDs missing from `update_cats` dict
#34
caufieldjh
closed
12 months ago
0
Fix for #32
#33
caufieldjh
closed
1 year ago
0
Node categories: if starting with OntologyClass, don't always replace with the last assigned category by edges
#32
caufieldjh
closed
1 year ago
0
Fix for node categories getting overwritten by those defined by edges
#31
caufieldjh
closed
1 year ago
0
Bump dependencies and version
#30
caufieldjh
closed
1 year ago
0
Relax kgx constraints, now that the current version is above 2.0
#29
kevinschaper
closed
1 year ago
1
Refresh and update dependencies
#28
caufieldjh
closed
1 year ago
0
Repair removal of category edges
#27
caufieldjh
closed
1 year ago
0
Category edges persist, with incorrect objects
#26
caufieldjh
closed
1 year ago
2
Fix an issue with assigning categories to some ids
#25
caufieldjh
closed
1 year ago
0
Add function to parse namespace-based category maps
#24
caufieldjh
closed
1 year ago
0
Default argument parsing isn't working correctly
#23
caufieldjh
opened
1 year ago
0
Fix for #21
#22
caufieldjh
closed
1 year ago
0
Error on checking for list of edges to remove
#21
caufieldjh
closed
1 year ago
0
Fix for IndexError on search for STY IRI
#20
caufieldjh
closed
1 year ago
1
IndexError on checking for STY category
#19
caufieldjh
closed
1 year ago
0
Fix for category remapping
#18
caufieldjh
closed
1 year ago
0
ID remapped nodes don't get category remapped
#17
caufieldjh
closed
1 year ago
0
Updates to handle Bioportal normalization
#16
caufieldjh
closed
1 year ago
0
Black formatting
#15
caufieldjh
closed
1 year ago
0
Consider blackening this project
#14
cthoyt
closed
1 year ago
1
Some OBO IDs are parsed incorrectly
#13
caufieldjh
closed
1 year ago
2
Update process for parsing UMLS semantic type category assignments
#12
caufieldjh
closed
1 year ago
0
Fixes for better performance
#11
caufieldjh
closed
1 year ago
0
Run on KG-Phenio corrects OntologyClass but doesn't update to more specific category
#10
caufieldjh
closed
1 year ago
1
Duplication of functionality of Bioregistry
#9
cthoyt
opened
1 year ago
2
Auto-update SSSOM maps
#8
caufieldjh
opened
1 year ago
1
Check for existence of conflicting category assignments
#7
caufieldjh
opened
1 year ago
2
Update and normalize Biolink categories
#6
caufieldjh
closed
1 year ago
0
Add more Biolink category checks
#5
caufieldjh
closed
1 year ago
2
Accept SSSOM map input for node ID and category remapping
#4
caufieldjh
closed
1 year ago
0
Prefix normalization, and related additions
#3
caufieldjh
closed
1 year ago
0
Provide option to accept SSSOM map as input
#1
caufieldjh
closed
1 year ago
2
Implement prefix normalization
#2
caufieldjh
closed
1 year ago
1