Output when "--bin-size" is changed

KolmogorovLab / Wakhan

Haplotype-specific somatic copy number aberrations/profiling from long reads sequencing data

MIT License

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Output when "--bin-size" is changed #8

Closed shirotak closed 1 month ago

shirotak commented 6 months ago

Thank you for your developing such a great tool.
When I set --bin-size=10000, calculation was completed without error, but the output looks wrong.
I would appreciate it if you could make adjustments to obtain the correct output.
Thank you in advance!

newplot (6) newplot (7) ... newplot (8) newplot (9) newplot (10) newplot (11) newplot (12) newplot (13)

tahashmi commented 6 months ago

Sorry for this, can you please follow this step to copy the coverage data and then update the code and rerun to check if it's fixed? Also since 1395 has too much noise in coverage, better to use this parameter.