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KolmogorovLab / hapdup

Pipeline to convert a haploid assembly into diploid
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hapdup_phased_{1,2}.fasta #36

Closed EDISON2022W closed 1 year ago

EDISON2022W commented 1 year ago

Are the contigs in hapdup_phased_1.fasta from the same haplotype? Thanks

mikolmogorov commented 1 year ago

Yes, all contigs in hapdup_phased* are from the same phased block, so same haplotype. Contig ends may include some unphased sequence.