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KordingLab / Neural_Decoding

A python package that includes many methods for decoding neural activity
BSD 3-Clause "New" or "Revised" License
412 stars 117 forks source link

save data for python examples in another format #4

Closed neuromusic closed 6 years ago

neuromusic commented 6 years ago

it's incredibly dangerous for users like myself to trust the pickle files that you've shared.

see e.g. https://www.cs.uic.edu/~s/musings/pickle/

can you convert these to HDF5? (try deepdish.io: http://deepdish.readthedocs.io/en/latest/io.html)

jglaser2 commented 6 years ago

Thanks for the feedback. I'll try to do this in the next few days.

In the meantime, you can take the ".mat" file I have also shared, and run it through the "Example_format_data" notebook to get the python file I have pickled.

jglaser2 commented 6 years ago

The files are also all in '.h5' format now: https://www.dropbox.com/sh/n4924ipcfjqc0t6/AACPWjxDKPEzQiXKUUFriFkJa?dl=0