KoslickiLab / L2-UniFrac

Expansion upon Median Unifrac to compute average phylogenetic distances between samples according to their UniFrac distance without producing negative abundance vectors.
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Write introduction #17

Closed dkoslicki closed 3 years ago

dkoslicki commented 3 years ago

Start big: what UniFrac is, how it is used Begin to focus in: recent developments (StripedUnifrac, EMDUniFrac, DPCoA papers that Jason cites) Detail the problem: with huge data sets, is computationally burdensome to compute all pairwise distances Present the solution: L2UniFrac and means