Expansion upon Median Unifrac to compute average phylogenetic distances between samples according to their UniFrac distance without producing negative abundance vectors.
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Split main.py into individual scripts performing one function each and include documentations #27
Create a script for each of the functions below (and add more as you see fit) and remove the part form main.py once a corresponding script is created. Name the script as you see fit but try to be clear in its purpose and consistent in naming conventions.
[ ] Get L2 UniFrac: given a list of vectors, push up all vectors and take L2 average and push down and return the vector
[ ] generate_diffab: generate diffabund plot given 2 samples
Create a script for each of the functions below (and add more as you see fit) and remove the part form main.py once a corresponding script is created. Name the script as you see fit but try to be clear in its purpose and consistent in naming conventions.
to be continued...