KoslickiLab / YACHT

A mathematically characterized hypothesis test for organism presence/absence in a metagenome
MIT License
28 stars 7 forks source link

Resolving #44 #101

Closed mahmudhera closed 6 months ago

mahmudhera commented 7 months ago

Tests have shown that all erroneous cases are captured by current checks, including non-existing relative and absolute paths. The code also works correctly with correct relative and absolute paths as well. Therefore, as discussed with David, showing error messages and exiting instead of crashing the program.

codecov[bot] commented 7 months ago

Codecov Report

Attention: 3 lines in your changes are missing coverage. Please review.

Comparison is base (6d3cbb4) 72.06% compared to head (e4524d6) 71.92%.

Files Patch % Lines
yacht/run_YACHT.py 0.00% 3 Missing :warning:
Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #101 +/- ## ========================================== - Coverage 72.06% 71.92% -0.14% ========================================== Files 11 11 Lines 1056 1058 +2 ========================================== Hits 761 761 - Misses 295 297 +2 ```

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mfl15 commented 7 months ago

https://github.com/KoslickiLab/YACHT/issues/44

sonarcloud[bot] commented 6 months ago

Quality Gate Passed Quality Gate passed

Issues
0 New issues

Measures
0 Security Hotspots
No data about Coverage
0.0% Duplication on New Code

See analysis details on SonarCloud