Integrate the `yacht sketch` functions

codecov[bot] commented 8 months ago

Codecov Report

Attention: 65 lines in your changes are missing coverage. Please review.

Comparison is base (15e943a) 80.30% compared to head (be87df4) 77.65%.

Files	Patch %	Lines
yacht/sketch_ref_genomes.py	35.18%	35 Missing :warning:
yacht/sketch_sample.py	40.00%	30 Missing :warning:

Additional details and impacted files

```diff @@ Coverage Diff @@ ## main #90 +/- ## ========================================== - Coverage 80.30% 77.65% -2.66% ========================================== Files 21 23 +2 Lines 1488 1602 +114 ========================================== + Hits 1195 1244 +49 - Misses 293 358 +65 ```

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chunyuma commented 8 months ago

Hi @dkoslicki @mfl15, this PR just adds two scripts created by Andreas for sketching genomes and samples. It doesn't affect anything. A few more changes are needed to integrate them into yacht (e.g., yacht sketch). You can now approve this PR to merge it into main. Or You can wait until I have successfully made them work in the next few weeks.