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KoslickiLab / YACHT

A mathematically characterized hypothesis test for organism presence/absence in a metagenome
MIT License
28 stars 7 forks source link

Fix codesmells #93

Closed chunyuma closed 7 months ago

chunyuma commented 7 months ago

Fixed some codesmells issues reported from https://sonarcloud.io/summary/overall?id=KoslickiLab_YACHT. This is a task YAC-93.

codecov[bot] commented 7 months ago

Codecov Report

Attention: 6 lines in your changes are missing coverage. Please review.

Comparison is base (e7f1731) 77.65% compared to head (31de56c) 77.88%.

Files Patch % Lines
yacht/utils.py 72.72% 3 Missing :warning:
yacht/run_YACHT.py 33.33% 2 Missing :warning:
yacht/make_training_data_from_sketches.py 0.00% 1 Missing :warning:
Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #93 +/- ## ========================================== + Coverage 77.65% 77.88% +0.22% ========================================== Files 23 23 Lines 1602 1605 +3 ========================================== + Hits 1244 1250 +6 + Misses 358 355 -3 ```

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sonarcloud[bot] commented 7 months ago

Quality Gate Passed Quality Gate passed

Kudos, no new issues were introduced!

0 New issues
0 Security Hotspots
No data about Coverage
0.0% Duplication on New Code

See analysis details on SonarCloud