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KrishnaswamyLab / Multiscale_PHATE

Creating multi-resolution embeddings and clusters from high dimensional data
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ValueError: matmul: Input operand 1 has a mismatch in its core dimension 0, with gufunc signature (n?,k),(k,m?)->(n?,m?) #14

Open fabotao opened 1 year ago

fabotao commented 1 year ago

tree = mp_op.build_tree() Calculating base visualization... Calculated base visualization in 0.01 seconds. Calculating tree... Calculated tree in 0.06 seconds. Traceback (most recent call last): File "", line 1, in File "/data/Home/fabotao/software/ENTER/envs/MultiPhate/lib/python3.11/site-packages/multiscale_phate/multiscale_phate.py", line 261, in build_tree return visualize.build_condensation_tree( ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/data/Home/fabotao/software/ENTER/envs/MultiPhate/lib/python3.11/site-packages/multiscale_phate/visualize.py", line 144, in build_condensation_tree tree_phate = Ps[l] @ tree_phate_1


ValueError: matmul: Input operand 1 has a mismatch in its core dimension 0, with gufunc signature (n?,k),(k,m?)->(n?,m?) (size 77566 is different from 77565)