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Kurt-Hetrick / CIDR_SOMATIC_WES_PIPELINES

currently for paired tumor - normal WES samples processed with TWIST UMIs
MIT License
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change unmapped bam files to unmapped cram files #11

Open Kurt-Hetrick opened 1 year ago

Kurt-Hetrick commented 1 year ago

judging by how they are used there should be no reason why these can't be cram files and if these need to be kept because I can't merge the demuxing pipeline with the qc pipeline then that should save significant space

Kurt-Hetrick commented 1 year ago

not sure if this actually will save any space though. should probably look at that first.