allow demuxing to use run folders from the novaseqx

Kurt-Hetrick / CIDR_SOMATIC_WES_PIPELINES

currently for paired tumor - normal WES samples processed with TWIST UMIs

MIT License

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allow demuxing to use run folders from the novaseqx #44

Closed Kurt-Hetrick closed 1 year ago

Kurt-Hetrick commented 1 year ago

can implement a fundamental change that can do a lookup in either run folder and pass on down. thankfully it looks like the needed output paths (subdirectories) are the same regardless of instrument.

Kurt-Hetrick commented 1 year ago

done