Kurt-Hetrick / CIDR_WES

CIDR's production pipeline for WES and other targeted DNA sequencing projects.
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revamp fastq file lookup for the umpteenth time #132

Open Kurt-Hetrick opened 1 year ago

Kurt-Hetrick commented 1 year ago

with the advent of the cluster known as demuxing with the novaseqx, there is so many potential failings that I'm not even going to amuse what they are here, but I would expect that I might have to rip out this entire logic tree and start from scratch...again. In any case, i think one potential fail scenario is when requeuing happens more than 10 times, but i have a feeling that there are other potential scenarios. just going to leave this here for awhile.