make qc report generator more robust: mark duplicates

Kurt-Hetrick / CIDR_WES

CIDR's production pipeline for WES and other targeted DNA sequencing projects.

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Closed Kurt-Hetrick closed 4 years ago

Kurt-Hetrick commented 4 years ago

when estimated library size is > 0 and there are unmapped reads but there are no unpaired reads then unpaired dup rate is NaN

Kurt-Hetrick commented 4 years ago

done