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KwanLab / Autometa

Autometa: Automated Extraction of Genomes from Shotgun Metagenomes
https://autometa.readthedocs.io
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Refactor samplesheet #228

Closed evanroyrees closed 2 years ago

evanroyrees commented 2 years ago

Now samplesheet takes input cov_from_assembly instead of cov_from_contig_headers so in the future, other assembler contig header parsers may be easily added.

codecov[bot] commented 2 years ago

Codecov Report

Merging #228 (76b9d28) into dev (6579f90) will not change coverage. The diff coverage is n/a.

:exclamation: Current head 76b9d28 differs from pull request most recent head b898249. Consider uploading reports for the commit b898249 to get more accurate results Impacted file tree graph

@@           Coverage Diff           @@
##              dev     #228   +/-   ##
=======================================
  Coverage   27.36%   27.36%           
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  Files          45       45           
  Lines        5314     5314           
=======================================
  Hits         1454     1454           
  Misses       3860     3860
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unittests 27.36% <ø> (ø)

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