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KwanLab / Autometa

Autometa: Automated Extraction of Genomes from Shotgun Metagenomes
https://autometa.readthedocs.io
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🔥🍏 Remove duplicate nextflow runtime defaults #251

Closed evanroyrees closed 2 years ago

evanroyrees commented 2 years ago

Running through nf-core launch KwanLab/Autometa and not specifying any changes for max_cpus or max_time.

will use defaults specified in nextflow.config

https://github.com/KwanLab/Autometa/blob/f00e67de2869d4ac90226e8a15cabbc7c427b7d3/nextflow.config#L106-L108

However, the defaults mentioned to the user do not match:

https://github.com/KwanLab/Autometa/blob/f00e67de2869d4ac90226e8a15cabbc7c427b7d3/nextflow_schema.json#L223-L240