KwanLab / Autometa

Autometa: Automated Extraction of Genomes from Shotgun Metagenomes
https://autometa.readthedocs.io
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Release 2.2.1 #344

Closed evanroyrees closed 1 year ago

evanroyrees commented 1 year ago

Release 2.2.1

Summary of changes

codecov[bot] commented 1 year ago

Codecov Report

Patch coverage: 34.21% and project coverage change: -0.32% :warning:

Comparison is base (70fd052) 27.62% compared to head (2363789) 27.31%. Report is 3 commits behind head on main.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #344 +/- ## ========================================== - Coverage 27.62% 27.31% -0.32% ========================================== Files 50 50 Lines 5734 5734 ========================================== - Hits 1584 1566 -18 - Misses 4150 4168 +18 ``` | [Flag](https://app.codecov.io/gh/KwanLab/Autometa/pull/344/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=KwanLab) | Coverage Δ | | |---|---|---| | [unittests](https://app.codecov.io/gh/KwanLab/Autometa/pull/344/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=KwanLab) | `27.31% <34.21%> (-0.32%)` | :arrow_down: | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=KwanLab#carryforward-flags-in-the-pull-request-comment) to find out more. | [Files Changed](https://app.codecov.io/gh/KwanLab/Autometa/pull/344?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=KwanLab) | Coverage Δ | | |---|---|---| | [autometa/binning/large\_data\_mode.py](https://app.codecov.io/gh/KwanLab/Autometa/pull/344?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=KwanLab#diff-YXV0b21ldGEvYmlubmluZy9sYXJnZV9kYXRhX21vZGUucHk=) | `0.00% <0.00%> (ø)` | | | [autometa/validation/datasets.py](https://app.codecov.io/gh/KwanLab/Autometa/pull/344?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=KwanLab#diff-YXV0b21ldGEvdmFsaWRhdGlvbi9kYXRhc2V0cy5weQ==) | `0.00% <0.00%> (ø)` | | | [autometa/taxonomy/gtdb.py](https://app.codecov.io/gh/KwanLab/Autometa/pull/344?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=KwanLab#diff-YXV0b21ldGEvdGF4b25vbXkvZ3RkYi5weQ==) | `19.23% <14.28%> (-1.79%)` | :arrow_down: | | [autometa/taxonomy/database.py](https://app.codecov.io/gh/KwanLab/Autometa/pull/344?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=KwanLab#diff-YXV0b21ldGEvdGF4b25vbXkvZGF0YWJhc2UucHk=) | `52.29% <57.14%> (+0.44%)` | :arrow_up: | | [autometa/binning/unclustered\_recruitment.py](https://app.codecov.io/gh/KwanLab/Autometa/pull/344?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=KwanLab#diff-YXV0b21ldGEvYmlubmluZy91bmNsdXN0ZXJlZF9yZWNydWl0bWVudC5weQ==) | `82.79% <75.00%> (-9.10%)` | :arrow_down: | | [autometa/taxonomy/vote.py](https://app.codecov.io/gh/KwanLab/Autometa/pull/344?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=KwanLab#diff-YXV0b21ldGEvdGF4b25vbXkvdm90ZS5weQ==) | `62.31% <80.00%> (+0.37%)` | :arrow_up: | | [autometa/binning/recursive\_dbscan.py](https://app.codecov.io/gh/KwanLab/Autometa/pull/344?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=KwanLab#diff-YXV0b21ldGEvYmlubmluZy9yZWN1cnNpdmVfZGJzY2FuLnB5) | `85.24% <100.00%> (+0.50%)` | :arrow_up: |

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