"Ready to Submit" button is not always present in results page

LANL-Bioinformatics / EDGE

EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.

https://lanl-bioinformatics.github.io/EDGE/

GNU General Public License v3.0

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"Ready to Submit" button is not always present in results page #37

Closed mshakya closed 4 years ago

mshakya commented 4 years ago

I ran some nanopore samples (SRR11313280 and SRR11313494) through edge-covid19. In the results page, there was no "Ready to Submit" column. They had really low coverage and lots of Ns. However, when I ran an Illumina sample with decent coverage, it did show up. I am not sure if its nanopore specific or it just doesn't show up if the consensus genome threshold is not met. I think it should show up regardless, and if it doesnt meet the threshold maybe we add a red X instead of green check mark.

mshakya commented 4 years ago

Update: another nanopore project just finished and this time there is "Ready to Submit" column and has a green check mark.

chienchi commented 4 years ago

It is intend behavior. Only project pass the criteria will show the column and button, no matter what sequencing platform.