Identifying Bacillus at the STRAIN level with GOTTCHA

LANL-Bioinformatics / GOTTCHA

Accurate read-based metagenome characterization using a hierarchical suite of unique signatures. Please visit our homepage:

http://lanl-bioinformatics.github.io/GOTTCHA

GNU General Public License v3.0

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Open estyholt opened 8 years ago

estyholt commented 8 years ago

Hello,

I would like to know if it's possible to achieve strain-level sensitivity for Bacillus with GOTTCHA.

Thanks!

scholzmb commented 8 years ago

Not sure how to answer this. There are certainly plenty of fragments in the genus level DB for mapping.