LANL-Bioinformatics / PanGIA

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Mapping Issue #3

Open zeliy90 opened 4 years ago

zeliy90 commented 4 years ago

Hi everytime I run pangia I get this error message when its trying to map my reads could you tell me why?

[ERROR] error occurred while running read mapping (code: 1, message: + bwa mem -k40 -T60 -h100 -B2 -t24 database/NCBI_genomes_refseq89_BAV.fa SRR172902.fastq