Ability to work with compressed fastqs!

LANL-Bioinformatics / PhaME

Given a reference, PhaME extracts SNPs from complete genomes, draft genomes and/or reads. Uses SNP multiple sequence alignment to construct a phylogenetic tree. Provides evolutionary analyses (genes under positive selection) using CDS SNPs.

GNU General Public License v3.0

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Ability to work with compressed fastqs! #12

Open caonetto opened 3 years ago

caonetto commented 3 years ago

Would be nice if the pipeline was optimised to work with compressed files.