LANL-Bioinformatics / PhaME

Given a reference, PhaME extracts SNPs from complete genomes, draft genomes and/or reads. Uses SNP multiple sequence alignment to construct a phylogenetic tree. Provides evolutionary analyses (genes under positive selection) using CDS SNPs.
GNU General Public License v3.0
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I suggest updating the "phame" file #28

Open SerhEL opened 5 months ago

SerhEL commented 5 months ago

This allows for an optional comment to be omitted.

# before
if (/cutoff\s*=\s*(\d+\.*\d+)\s*#.*$/) { $cutoff = $1; }
# after
if (/cutoff\s*=\s*(\d+\.*\d+)\s*(?:#.*|)$/) { $cutoff = $1; }