Closed vinzenzunger closed 8 years ago
Hi. This is an issue with packaging. Can you please tell me more about your OS? Thanks.
The Macs running Yosemite (10.10.3 and 10.10.4). I "accidentally" found a work around ...I installed the previous/old 2dx version (stable release) and followed that by installation of the new version, and now it works just fine. Currently only scratching my head how to convert .dm4 movies to .mrc movies without loosing data, so that I could try the movie processing mode to see what difference that makes. So far, I haven't figured that part out, and the manuals are not yet flashed out to give good instructions how to deal with movie files. Thanks for your help!
So this should be done now! See below the otool -L command output:
Users/bs-hudson/jenkins/jenkins_builds/trunk_nb_inst/kernel/mrc/lib/libgfortran.3.dylib: /opt/local/lib/libgcc/libgfortran.3.dylib (compatibility version 4.0.0, current version 4.0.0) @executable_path/../lib/libquadmath.0.dylib (compatibility version 1.0.0, current version 1.0.0) @executable_path/../lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1213.0.0) @executable_path/../lib/libgcc_s.1.dylib (compatibility version 1.0.0, current version 1.0.0)
@vinzenzunger can you please delete all installed versions of 2dx and do a fresh installation using latest files in: http://www.2dx.unibas.ch/download/2dx-software/2dx-for-mac-.pkg
Hi Nihkil, Thank you very much for looking into it. I will try it on our lab iMac when I get back from Thanksgiving break next week. Have a great weekend Best wishes Vinzenz
Northwestern University Dept of Molecular Biosciences 2205 Tech Dr Hogan 2-100 Evanston, IL 60208
office: Silverman 4619 phone: (847) 467-2178
From: Nikhil Biyani notifications@github.com<mailto:notifications@github.com> Reply-To: C-CINA/2dx reply@reply.github.com<mailto:reply@reply.github.com> Date: Thursday, November 26, 2015 at 4:57 AM To: C-CINA/2dx 2dx@noreply.github.com<mailto:2dx@noreply.github.com> Cc: Vinzenz Unger v-unger@northwestern.edu<mailto:v-unger@northwestern.edu> Subject: Re: [2dx] "image not found" error as going along (#122)
So this should be done now! See below the otool -L command output:
Users/bs-hudson/jenkins/jenkins_builds/trunk_nb_inst/kernel/mrc/lib/libgfortran.3.dylib: /opt/local/lib/libgcc/libgfortran.3.dylib (compatibility version 4.0.0, current version 4.0.0) @executable_path/../lib/libquadmath.0.dylib (compatibility version 1.0.0, current version 1.0.0) @executable_path/../lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1213.0.0) @executable_path/../lib/libgcc_s.1.dylib (compatibility version 1.0.0, current version 1.0.0)
@vinzenzungerhttps://github.com/vinzenzunger can you please delete all installed versions of 2dx and do a fresh installation using latest files in: http://www.2dx.unibas.ch/download/2dx-software/2dx-for-mac-.pkg
Reply to this email directly or view it on GitHubhttps://github.com/C-CINA/2dx/issues/122#issuecomment-159879194.
Hello, just updated to 3.5.0 ....nice new look! All seems to go well until I try run the Defocus&Tilt Calculation. There is comes up with the following
2dx_getDefTilt
==== Using CTFTILT. =================================================================================================== Using resolution range 80.0A ... 7A, and tiles of 128 pixels width. ==== 2dx_ctftilt - to get defocus and tilt. ===========================================================================
2dx_getDefTilt finished.
dyld: Library not loaded: /opt/2dx/kernel/mrc/lib/libquadmath.0.dylib Referenced from: /Applications/2dx/kernel/mrc/lib/libgfortran.3.dylib Reason: image not found
Any suggestions Best wishes Vinzenz