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LBM-EPFL / PeSTo

Geometric deep learning method to predict protein binding interfaces from a protein structure.
https://pesto.epfl.ch
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missing files #9

Closed pengzhangzhi closed 1 year ago

pengzhangzhi commented 1 year ago

Hi, the following files are missed in this repo. training_exclusion_lists = [ # "data/lists/ppdb5_set.txt", # "data/lists/masif-site_test_set.txt", # "data/lists/skempi_v2.txt", # "data/lists/memcplxdb.txt", # "data/lists/excluded.txt" ] would you like to upload them? Best, Zhangzhi

rubenalv commented 1 year ago

@pengzhangzhi If it helps, some of them were defined in the paper of MaSIF (https://github.com/LPDI-EPFL/masif). I did not use them so I did not dig for them, otherwise I would give you a better pointer.