Closed stelmo closed 2 years ago
Solving a pFBA model that does not admit an LP solution in its first stage causes an error:
julia> ecoli_sol = parsimonious_flux_balance_analysis_dict( ecoli, CPLEX.Optimizer; modifications = [ change_constraint("EX_glc__D_e", lb = 0), change_constraint("EX_ac_e", lb = 1), change_constraint("EX_for_e", lb = 1), change_constraint("EX_etoh_e", lb = 1), change_constraint("EX_lac__D_e", lb = 1), change_constraint("EX_leu__L_e", lb = -200.0), COBREXA.silence, ] ) ERROR: MethodError: no method matching termination_status(::Nothing) Closest candidates are: termination_status(::Model) at C:\Users\stelmo\.julia\packages\JuMP\0C6kd\src\JuMP.jl:675 Stacktrace: [1] is_solved(opt_model::Nothing) @ COBREXA C:\Users\stelmo\.julia\packages\COBREXA\Eyw1f\src\base\solver.jl:45 [2] flux_dict(model::StandardModel, opt_model::Nothing) @ COBREXA C:\Users\stelmo\.julia\packages\COBREXA\Eyw1f\src\base\solver.jl:126 [3] #parsimonious_flux_balance_analysis_dict#539 @ C:\Users\stelmo\.julia\packages\COBREXA\Eyw1f\src\analysis\parsimonious_flux_balance_analysis.jl:120 [inlined] [4] top-level scope @ REPL[71]:1
ah yes, either the accessor functions should be ready for nothing instead of a model, or it should just return the unsolved model.
nothing
I guess returning the unsolved model would be preferable.
closed by #659
Solving a pFBA model that does not admit an LP solution in its first stage causes an error: