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LCSB-BioCore / COBREXA.jl

Constraint-Based Reconstruction and EXascale Analysis
https://lcsb-biocore.github.io/COBREXA.jl/
Apache License 2.0
42 stars 8 forks source link

Add more reconstruction functions to ObjectModel #739

Closed stelmo closed 1 year ago

stelmo commented 1 year ago

Adds non-inplace reconstruction functions and pipes for ObjectModel. Looking at the code, it screams "use a macro", but let's do this after 2.0 is out

stelmo commented 1 year ago

/format

github-actions[bot] commented 1 year ago

:heavy_check_mark: Auto-formatting triggered by this comment succeeded, commited as a763433aa384677ae4b3ae1508f2e401184120bb

codecov[bot] commented 1 year ago

Codecov Report

Base: 89.58% // Head: 88.33% // Decreases project coverage by -1.25% :warning:

Coverage data is based on head (a763433) compared to base (b8e7f1d). Patch coverage: 0.00% of modified lines in pull request are covered.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## next #739 +/- ## ========================================== - Coverage 89.58% 88.33% -1.25% ========================================== Files 85 85 Lines 2054 2083 +29 ========================================== Hits 1840 1840 - Misses 214 243 +29 ``` | [Impacted Files](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/739?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore) | Coverage Δ | | |---|---|---| | [src/reconstruction/ObjectModel.jl](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/739?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore#diff-c3JjL3JlY29uc3RydWN0aW9uL09iamVjdE1vZGVsLmps) | `81.61% <0.00%> (-17.49%)` | :arrow_down: | | [src/reconstruction/pipes/generic.jl](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/739?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore#diff-c3JjL3JlY29uc3RydWN0aW9uL3BpcGVzL2dlbmVyaWMuamw=) | `26.66% <0.00%> (-13.34%)` | :arrow_down: | Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore)

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