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LCSB-BioCore / COBREXA.jl

Constraint-Based Reconstruction and EXascale Analysis
https://lcsb-biocore.github.io/COBREXA.jl/
Apache License 2.0
42 stars 8 forks source link

Homogenize bound kwargs #746

Closed stelmo closed 1 year ago

stelmo commented 1 year ago

lower -> lower_bound and upper -> upper_bound everywhere

codecov[bot] commented 1 year ago

Codecov Report

Base: 88.28% // Head: 88.28% // No change to project coverage :thumbsup:

Coverage data is based on head (d18fdbc) compared to base (65f79be). Patch coverage: 100.00% of modified lines in pull request are covered.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## next #746 +/- ## ======================================= Coverage 88.28% 88.28% ======================================= Files 85 85 Lines 2075 2075 ======================================= Hits 1832 1832 Misses 243 243 ``` | [Impacted Files](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/746?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore) | Coverage Δ | | |---|---|---| | [src/macros/change\_bounds.jl](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/746?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore#diff-c3JjL21hY3Jvcy9jaGFuZ2VfYm91bmRzLmps) | `100.00% <ø> (ø)` | | | [src/analysis/modifications/generic.jl](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/746?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore#diff-c3JjL2FuYWx5c2lzL21vZGlmaWNhdGlvbnMvZ2VuZXJpYy5qbA==) | `78.26% <100.00%> (ø)` | | | [src/analysis/modifications/knockout.jl](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/746?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore#diff-c3JjL2FuYWx5c2lzL21vZGlmaWNhdGlvbnMva25vY2tvdXQuamw=) | `100.00% <100.00%> (ø)` | | | [src/reconstruction/MatrixCoupling.jl](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/746?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore#diff-c3JjL3JlY29uc3RydWN0aW9uL01hdHJpeENvdXBsaW5nLmps) | `96.05% <100.00%> (ø)` | | | [src/reconstruction/MatrixModel.jl](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/746?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore#diff-c3JjL3JlY29uc3RydWN0aW9uL01hdHJpeE1vZGVsLmps) | `97.01% <100.00%> (ø)` | | | [src/reconstruction/ObjectModel.jl](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/746?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore#diff-c3JjL3JlY29uc3RydWN0aW9uL09iamVjdE1vZGVsLmps) | `81.61% <100.00%> (ø)` | | | [src/solver.jl](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/746?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore#diff-c3JjL3NvbHZlci5qbA==) | `96.77% <100.00%> (ø)` | | Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore)

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